FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333953

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333953
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5251034
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG6009.943091E-68.04910269
CGTCGTG5150.00106315437.367829368
GCGTCGT5250.00130408397.2274967
TAGATCG4900.00533549447.039762568
GTCGTGT6452.1087802E-46.952712569
AAGATCG9452.829911E-76.9354768
AGATCGG15801.8189894E-126.76823269
CGGAAGA14557.853487E-85.689870467
ATCGGAA13805.678554E-65.24941565
AGAGCGT9950.00120681945.20022767
GATCGGA14401.22817E-55.030689264
Produced by FastQC (version 0.11.5)