FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005333978

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005333978
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4739470
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG5350.010.62438992-93
GATCGGA5906.3118932E-98.028316592-93
ATCGGAA8656.91216E-117.1187594-95
CAGACGG8050.0041670916.47245038
Produced by FastQC (version 0.11.5)