FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334022

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334022
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5178758
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG1851.0229141E-414.9180646
CGTAGTC2250.00743202910.7392482
ATGCCGT3100.0077073418.90271447
TGCCGTC3150.0087867748.76140148
CTCGTAT3200.0099947118.62450442
TCTCGTA3200.0099970778.62425441
GCCGTCT4150.00964677157.481497349
ATCGGAA12009.278665E-96.61256768
TCGGAAG12552.3364919E-86.322773569
GATCGGA12701.958997E-75.976265467
AGATCGG13355.1587085E-75.685450666
Produced by FastQC (version 0.11.5)