FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334024

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334024
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5818762
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCATCG2700.002466123310.22127219
ACACGTC5552.8682456E-47.459984368
ATCGGAA11751.1713502E-55.57911669
GATCGGA12455.2387495E-65.542558769
AGATCGG12909.760008E-65.34921368
GACGCTC11302.1778679E-45.1927734
Produced by FastQC (version 0.11.5)