FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334028

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334028
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5599921
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACATCG3150.0087793398.76232966
TAGATCG4906.238949E-47.74534368
ATCGGAA11106.8148984E-76.21657368
TCGGAAG11803.1325908E-76.14018369
GATCGGA11651.618364E-65.922981767
AGATCGG12651.1454849E-65.72755166
Produced by FastQC (version 0.11.5)