FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334029

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334029
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5599921
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG4201.1834166E-49.03490269
TGATCGA3600.00269038888.62337826
GCGTCGT4200.00117660378.21340168
ATCGAGG3900.00553421167.96075142
AGCGTCG5150.0010626127.368203667
CGTGTAG4950.0058851786.96900867
TGGGCGA8751.9596194E-45.9506341
ATCGGAA11902.3662014E-65.797693768
CGACAGA8050.00304690385.57227135
TCGGAAG11801.2611768E-55.55458569
GATCGGA12001.6713075E-55.461959467
AGATCGG12707.447881E-65.432533766
CGGAAGA11502.853555E-45.0994568
Produced by FastQC (version 0.11.5)