FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334030

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334030
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6640329
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAGCCG2509.235507E-512.4352861
TATGCCG2255.3664413E-412.26668746
GTCGTCA2750.002870443510.03592828
CGTATGC2800.00333218539.85678944
TCGTATG3501.9032994E-49.85678943
CTCGTAT3956.394192E-48.73386442
TGCCGTC4150.0010439068.3133348
ATGCCGT4200.00117592578.21392947
TCTCGTA3950.0062013717.860477441
ATCGGAA13151.8735591E-106.82284669
GATCGGA12904.0879968E-86.152563668
AGATCGG13501.0324038E-75.878806667
Produced by FastQC (version 0.11.5)