FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334031

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334031
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6640329
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA1151.6989434E-624.00120546
GTCGCCG1704.9644885E-516.23610944
CGTCCGC1350.003244625415.33375760
TCGCCGT2500.001297752111.04055545
GGTCGCC3207.682146E-510.78162943
CGTATCA3854.5656445E-59.8574949
GCCGTAT3000.0058828619.20053147
TGGTCGC3400.00159764359.13253642
CTCGGTG7150.00505149835.78967237
GATCGGA14659.0418325E-85.65186368
ATCGGAA14901.2880264E-75.55703369
AGATCGG15008.578736E-75.290146467
Produced by FastQC (version 0.11.5)