FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334040

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334040
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5574981
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGATG1400.00413545614.7846574
TGCGGGC5150.0086287846.698670455
GATCGGA8954.365614E-56.16887269
TCGGAAG9156.0207218E-56.034033369
AGATCGG10308.428504E-66.030371769
Produced by FastQC (version 0.11.5)