FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334042

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334042
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5059008
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA9857.7947334E-87.006472669
AGATCGG10604.1065505E-86.83626868
GATCGGA10805.8633304E-86.709670569
TCGTCTG5800.0037234386.54253156
TCGGAAG9307.621463E-55.936666569
Produced by FastQC (version 0.11.5)