FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334062

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334062
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6065763
Sequences flagged as poor quality0
Sequence length75
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTCCGT2850.00385646559.68411151
GATCGGA12556.014714E-65.499175569
ATCGGAA12001.6650758E-55.463209666
AGATCGG15201.1113734E-65.221503368
TCGGAAG12704.273059E-55.162087467
Produced by FastQC (version 0.11.5)