FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334063

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334063
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6065763
Sequences flagged as poor quality0
Sequence length75
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCG700.001334057424.64427449
CGGGTAG3602.5246828E-49.58388443
CGTCGTG5050.00713476076.831850569
AGAGCGT8551.5529554E-46.052779768
TCGGAAG13052.0362186E-65.551906667
AAGAGCG14051.3777262E-65.402312867
Produced by FastQC (version 0.11.5)