FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334064

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334064
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6213782
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG9153.6379788E-129.05075667
ACACGTC9707.4633135E-97.471093769
GATCGGA27850.06.443394769
CAGATCG10802.8047962E-66.07108769
CGGAAGA24200.05.98922469
AGATCGG30050.05.971665468
ATCGGAA26150.05.806542469
TCGGAAG23700.05.678751568
GCACACG15059.137184E-75.273342667
CACACGT15109.739997E-75.25638968
Produced by FastQC (version 0.11.5)