FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334067

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334067
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5237821
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT1951.6027497E-414.15100164
CGTCGTG2406.3886044E-512.93465165
AGCGTCG2050.0037352911.77811963
GTCGTGT3652.0589268E-611.33996866
CGTGTAG3753.8122668E-49.19806268
TCGTGTA3450.00182941438.99758967
GATCGGA7603.0596086E-56.80777768
AGATCGG7854.8031732E-56.590590567
ATCGGAA8301.03643324E-46.23374669
Produced by FastQC (version 0.11.5)