FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334068

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334068
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4941183
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGGATC1550.00811893313.35397726
TAGATCG3450.00182481869.00005669
GATCGGA7652.434085E-46.313765568
ATCGGAA8752.1300782E-45.91432369
GCGGGGA8250.0040770355.43661843
CGGAAGA8300.0043800865.40364968
AGATCGG8950.00180673665.396682369
Produced by FastQC (version 0.11.5)