FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334072

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334072
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5880966
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACGCCG1300.002523740815.92272550
TATGCCG1808.094178E-515.333384546
CCCGTTA1500.00652224113.8034569
CGGTATC2409.2298945E-411.4995536
TGCCGTC3054.715915E-511.31122548
CGTATGC3451.6461009E-49.99969344
TCGTATG3803.9576684E-59.98653543
CTCGGTA2950.00512860169.35516734
ACGACAC3150.0087643728.7641768
GCCGTCT4653.5594418E-48.1611149
ACACGTC5603.1733647E-47.394767868
CCTCGGT6350.0095437745.976092333
ATCGGAA12802.2710083E-75.9311769
GATCGGA12859.090014E-65.37103868
Produced by FastQC (version 0.11.5)