FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334076

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334076
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6122842
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG2550.001531500310.82360646
CAACGAC2300.00877009210.50230469
TCTCGTA4000.00694165157.762173741
TCGGAAG13909.640644E-116.70290969
ACGTTGT5150.0086281046.698747661
ATCGGAA15006.039045E-106.21141368
GATCGGA15208.276402E-106.12933467
AGATCGG15601.5334081E-95.972171366
CCGCGCC14851.9746949E-85.807836532
CGGAAGA14709.664109E-85.633888269
ACCGCGC12901.6477352E-65.616043631
Produced by FastQC (version 0.11.5)