FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5913249
Sequences flagged as poor quality0
Sequence length75
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG5805.668801E-57.73257868
TCGGAAG13400.07.46624369
ATCGGAA14400.07.187331768
AGATCGG15950.07.13776469
GATCGGA14403.6379788E-126.94757867
GCTCTCG5900.0044487066.43210744
ACACGTC6450.00159384516.418291667
CACACGT10854.5309025E-76.35929869
Produced by FastQC (version 0.11.5)