FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334084

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334084
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5714041
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAGCGC902.1286914E-422.9985649
TAGATCG3301.0475992E-410.456820568
AGATCGG9152.764864E-108.29688669
GATCGGA9204.1994915E-45.625928466
CGGAAGA9950.00120100865.20213769
TCGGAAG9500.00380306955.08531768
Produced by FastQC (version 0.11.5)