FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4908855
Sequences flagged as poor quality0
Sequence length75
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGATCG5700.00310115146.657721567
CGGAAGA10401.4767047E-66.30310669
AGATCGG10953.56091E-65.986450768
GATCGGA10501.1542277E-55.91413266
TCGGAAG9651.3019308E-45.72040869
ATCGGAA10851.1923027E-45.40566568
Produced by FastQC (version 0.11.5)