FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334089

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334089
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4908855
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGCCG1056.031834E-419.71186344
GCGTCGT3300.00121976149.40659168
AGCGTCG3600.00269265368.62253467
TCGGAAG10308.48492E-66.027831669
GATCGGA10501.1577478E-55.91301669
ATCGGAA10801.8232498E-55.74847368
AGATCGG10751.0416381E-45.45436568
CGGAAGA10856.922103E-45.086465469
Produced by FastQC (version 0.11.5)