FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334098

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334098
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3819895
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA4251.746048E-89.47360994-95
AGATCGG4453.689638E-89.04782994-95
Produced by FastQC (version 0.11.5)