FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334099

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334099
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3819895
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA4951.9696563E-78.15571594-95
AGATCGG5853.5893027E-77.3069394-95
TCGGAAG5801.2720682E-46.14160192-93
ATCGGAA5200.0092669255.48019892-93
Produced by FastQC (version 0.11.5)