FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334100

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334100
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3478061
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG2053.7977836E-511.55390446-47
TTACGCT3200.00968417810.3624823
TCGGAAG5254.232418E-59.9254263
ACGGTAG2502.836932E-49.47331632-33
TCTCGTA2950.00147415528.02817540-41
CGGTAGC2800.0082628857.612486432-33
AGATCGG4159.47894E-57.418862394-95
CGTATGC3250.00381286197.28711444-45
CGGAAGA6700.00511442457.070354
ATGCCGT4050.00444182066.433146-47
CATCTCG5500.00288662785.59778838-39
Produced by FastQC (version 0.11.5)