FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334154

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334154
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5361868
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA8851.6370905E-117.22563894-95
AGATCGG11500.07.00223794-95
TAGATCG4250.00100184416.68725794-95
ATCGGAA9808.305506E-96.041676590-91
TCGGAAG10854.3839827E-75.238718590-91
Produced by FastQC (version 0.11.5)