FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334168

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334168
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3470766
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG2858.182924E-710.80290394-95
AGATCGG7100.010.00702394-95
GATCGGA6550.09.40099994-95
ATCGGAA7555.7833313E-76.27371994-95
Produced by FastQC (version 0.11.5)