FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334169

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334169
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3470766
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA6500.010.96094594-95
AGATCGG8400.09.04712994-95
TAGATCG3050.00199217777.786463792-93
AGCGTCG2800.0080616577.63351592-93
ATCGGAA6401.1296244E-56.30825294-95
TCGGAAG6601.187329E-45.75726492-93
Produced by FastQC (version 0.11.5)