FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334173

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334173
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5070286
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATTAC2050.00554214149.26758418-19
GCGCCCG8752.1389003E-57.5997189
GATCGGA6053.36065E-56.280635494-95
AGATCGG6801.8233548E-45.587918394-95
ATCGGAA7000.00160901475.08899794-95
Produced by FastQC (version 0.11.5)