FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334176

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334176
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4788622
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG7350.08.70006394-95
GATCGGA6051.0071744E-87.829257594-95
TAGATCG3458.183529E-47.551262490-91
TCGGAAG8001.6295344E-65.920875594-95
ATCGGAA7806.669203E-65.76905894-95
Produced by FastQC (version 0.11.5)