FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334178

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334178
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5306241
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG8200.08.08710392-93
ATCGGAA8851.8189894E-127.49313594-95
GATCGGA7507.334529E-86.631424494-95
TCGGAAG8051.8204792E-65.884138692-93
Produced by FastQC (version 0.11.5)