FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334179

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334179
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5306241
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA8000.08.31199794-95
AGATCGG9750.08.03797592-93
GATCGGA7857.2759576E-127.865765694-95
TCGGAAG8152.1593532E-65.82786894-95
Produced by FastQC (version 0.11.5)