FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334181

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334181
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5164640
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA7700.09.25277994-95
GATCGGA7350.09.04716294-95
AGATCGG8600.08.28446594-95
TAGATCG4106.452106E-46.950868694-95
TCGGAAG7851.1070206E-66.05064994-95
Produced by FastQC (version 0.11.5)