FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6222881
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA8100.09.64886794-95
ACCGCGC8101.1678389E-58.7710461
ACTGCGC8803.309785E-58.0733491
ACGCACG2850.0096774867.6570942
CTGCGCC15003.918103E-87.2742392
AGATCGG8553.965397E-106.925023694-95
TGCGCCC11157.6445554E-56.3730323
GCGCCCG9050.0020316226.28148564
GCGCCCA12353.0977334E-45.753794
CGAGAAT5100.0077114285.57251810-11
ATCGGAA9852.060884E-65.28973494-95
Produced by FastQC (version 0.11.5)