FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334185

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334185
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6222881
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC8056.559276E-910.0577531
GATCGGA7450.09.88202194-95
CCGCGCC12158.5216016E-87.42806342
TAGATCG4809.120526E-67.42147892-93
AGATCGG9001.1787051E-96.596869594-95
GCGCCCG12404.8012385E-56.12875374
CGCCCGG16201.9346044E-65.86388355
TGCGCCC10700.0020088575.771093
ATCGGAA8851.5479163E-65.635291694-95
Produced by FastQC (version 0.11.5)