FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334193

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334193
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5270870
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGGCC3350.00139676489.2680495
CGTGTTA5553.2675885E-58.08162420
GATCGGA9103.6319793E-45.68660269
AGATCGG9952.0219541E-45.547532669
Produced by FastQC (version 0.11.5)