FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334196

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334196
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5374272
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGCAC1200.001478696417.24832342
TCGGTGC3000.00588915549.19927735
GTGGACG3800.0043799038.17048639
GATCGGA7007.6532575E-56.900163769
CACGGAA5700.00310451076.65706219
GCCGGGA6300.0087888026.02395269
AGATCGG7800.00209767165.750136468
Produced by FastQC (version 0.11.5)