FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334198

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334198
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4663375
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGAAG6951.0227868E-67.942689469
ATCGGAA8301.4489386E-56.650805568
GATCGGA8351.5848058E-56.61048567
AGATCGG9156.041678E-56.03251966
CGGAAGA8300.00438254375.40337467
Produced by FastQC (version 0.11.5)