FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334200

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334200
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5230990
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG4251.3452946E-48.92901268
GATCGGA8208.753444E-56.310693768
AGATCGG8853.7191327E-56.23700969
ATCGGAA8701.9713596E-45.948009569
TCGGAAG7150.0050482375.78995168
TCACCGT8750.0081355545.125632313
Produced by FastQC (version 0.11.5)