FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334201

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334201
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5230990
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCAGA3150.0087736398.76300530
TCGGAAG7853.4026726E-46.15210968
GATCGGA8651.8240979E-45.98192368
AGATCGG9153.917131E-45.65493467
CGGAAGA8800.00146314625.48769969
ATCGGAA9506.5001886E-45.44643869
Produced by FastQC (version 0.11.5)