FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334216

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334216
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5125882
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCGA1200.001478037417.2494526
AGATCGG11655.0331437E-96.81060969
GATCGGA9652.9306302E-66.43471469
ATCGGAA9601.2102215E-45.74953669
TCGGAAG9556.9663767E-45.41841168
CGGAAGA8950.00180854225.39626566
Produced by FastQC (version 0.11.5)