FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334218

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334218
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5634427
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG11604.600224E-96.840231469
CGGAAGA10602.9752846E-76.50916268
TCGGAAG9803.7693862E-66.336413467
GATCGGA10602.0492698E-66.18370468
ATCGGAA11208.018724E-76.16045769
Produced by FastQC (version 0.11.5)