FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4898736
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGGTC900.005737693519.16628526
AGATCGG9405.456968E-128.80788569
TAGATCG4856.002016E-58.53547768
GATCGGA8301.03480335E-46.23443365
ATCGGAA8155.5050873E-45.925959666
TCGGAAG7800.00209991945.749592367
CGGAAGA8250.0040826825.435977569
CTCGCTC11001.4665525E-45.33171212
Produced by FastQC (version 0.11.5)