FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334227

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334227
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5987916
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGAAGA10409.892632E-65.97097569
AGATCGG9408.9274356E-55.872164269
GATCGGA8509.4088307E-45.68227768
TCGGAAG8000.0028356225.606175468
AGGATCG8400.0050446915.33921557
ATCGGAA9300.002925535.193392869
Produced by FastQC (version 0.11.5)