FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334229

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334229
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4831619
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG3801.9048457E-812.70967269
GCGTCGT2750.002869536610.03620867
CGTCGTG2850.00385804039.68355968
AGAGCGT6151.5913429E-78.97547167
CGTGTAG3750.00388421988.28004466
AGATCGG9201.3372046E-66.749546568
GATCGGA9201.3372046E-66.749546569
CGGAAGA9501.5749727E-56.173780463
ATCGGAA8954.3778524E-56.167629761
TCGGAAG8401.2186414E-46.160682762
AAGAGCG10751.684949E-55.776774466
TAGCCGG8750.0079533165.1355761
Produced by FastQC (version 0.11.5)