FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334232

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334232
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5076565
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGTCGG2150.005324787511.23163132
ACGAACC4650.00320096157.418742738
TCGGAAG8100.0032879515.536525768
AGATCGG9405.631856E-45.50481168
GATCGGA9150.00238820635.27820169
ATCGGAA9150.00238820635.27820167
CGGAAGA9550.0040751325.05712469
Produced by FastQC (version 0.11.5)