FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334236

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334236
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12954728
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCGTA5100.007853246.76449512
GATCGGA16952.9649527E-105.90215269
AGATCGG19009.094947E-105.446903768
TCGGAAG17208.616189E-85.21467169
Produced by FastQC (version 0.11.5)