FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334237

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334237
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12954728
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGCCG2100.0044683611.49911444
TCGCCGT2850.00385995819.68320345
TCGACTC3800.00437573068.17152765
CGAGGTA5500.00213332876.899015451
CTCGACT6200.00101805476.677832664
CGTCGTG5950.00485917376.378053758
AGCGTCG6650.002247196.225492569
AGTCGTG9103.6369878E-45.686221645
GATCGGA19009.076757E-105.44730669
ACCGGCC9100.00223188035.306935347
AGATCGG20254.614776E-95.11103368
Produced by FastQC (version 0.11.5)