FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334241

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334241
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4718318
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGAAG7503.8586222E-77.8197368
CGGAAGA8604.370704E-77.22083469
AGATCGG9602.6884663E-66.46866469
GATCGGA7803.127187E-46.192487266
ATCGGAA8004.3363316E-46.03722767
Produced by FastQC (version 0.11.5)