FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334242

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334242
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6084043
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACGACA3100.00770992468.90239632
GATCGGA10909.587893E-96.96276868
AGATCGG11754.264257E-86.459078367
ATCGGAA11451.7829734E-76.327076469
CGGAAGA10300.00190759685.023885768
Produced by FastQC (version 0.11.5)