FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334248

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334248
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4481297
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCCGA1550.00811371413.35523844
GATCGGA6754.7483227E-57.15521168
AGATCGG6805.2331667E-57.102598767
ATCGGAA6703.355399E-46.693707569
CGGAAGA6750.0026566816.13303868
Produced by FastQC (version 0.11.5)